mystic_CBK commited on
Commit
10b881c
·
1 Parent(s): d205f72

Fix clinical analysis to use 'out' key from finetuned model (actual working output)

Browse files
Files changed (1) hide show
  1. clinical_analysis.py +17 -0
clinical_analysis.py CHANGED
@@ -35,6 +35,23 @@ def analyze_ecg_features(model_output: Dict[str, Any]) -> Dict[str, Any]:
35
  clinical_result = extract_clinical_from_probabilities(probs)
36
  return clinical_result
37
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
38
  # NEW: Check if the model output IS the logits tensor directly (classifier model)
39
  elif isinstance(model_output, torch.Tensor):
40
  print("✅ Found direct logits tensor - using classifier model output")
 
35
  clinical_result = extract_clinical_from_probabilities(probs)
36
  return clinical_result
37
 
38
+ # NEW: Check for 'out' key (actual finetuned model output)
39
+ elif 'out' in model_output:
40
+ print("✅ Found 'out' key - using finetuned model output")
41
+ # FINETUNED MODEL - Extract real clinical predictions
42
+ logits = model_output['out']
43
+ if isinstance(logits, torch.Tensor):
44
+ # Remove batch dimension if present
45
+ if logits.dim() == 2: # [batch, num_labels]
46
+ logits = logits.squeeze(0) # Remove batch dimension
47
+ probs = torch.sigmoid(logits).detach().cpu().numpy().ravel()
48
+ else:
49
+ probs = 1 / (1 + np.exp(-np.array(logits).ravel()))
50
+
51
+ # Extract clinical parameters from probabilities
52
+ clinical_result = extract_clinical_from_probabilities(probs)
53
+ return clinical_result
54
+
55
  # NEW: Check if the model output IS the logits tensor directly (classifier model)
56
  elif isinstance(model_output, torch.Tensor):
57
  print("✅ Found direct logits tensor - using classifier model output")