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Tool embedding updates

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  1. immune_compass/checkpoint/finetuner_pft_all.pt +3 -0
  2. immune_compass/checkpoint/pft_leave_IMVigor210.pt +3 -0
  3. immune_compass/checkpoint/pretrainer.pt +3 -0
  4. pinnacle_cge/pinnacle_mg_embed.pth +3 -0
  5. pinnacle_cge/pinnacle_protein_embed.pth +3 -0
  6. pinnacle_cge/ppi_embed_dict.pth +3 -0
  7. transcriptformer_cge/follicular_lymphoma/b_cell_follicular_lymphoma.npy +3 -0
  8. transcriptformer_cge/follicular_lymphoma/b_cell_normal.npy +3 -0
  9. transcriptformer_cge/follicular_lymphoma/cd4_positive_alpha_beta_cytotoxic_t_cell_follicular_lymphoma.npy +3 -0
  10. transcriptformer_cge/follicular_lymphoma/cd4_positive_alpha_beta_cytotoxic_t_cell_normal.npy +3 -0
  11. transcriptformer_cge/follicular_lymphoma/cd4_positive_alpha_beta_t_cell_follicular_lymphoma.npy +3 -0
  12. transcriptformer_cge/follicular_lymphoma/cd4_positive_alpha_beta_t_cell_normal.npy +3 -0
  13. transcriptformer_cge/follicular_lymphoma/cd8_positive_alpha_beta_t_cell_follicular_lymphoma.npy +3 -0
  14. transcriptformer_cge/follicular_lymphoma/cd8_positive_alpha_beta_t_cell_normal.npy +3 -0
  15. transcriptformer_cge/follicular_lymphoma/effector_cd8_positive_alpha_beta_t_cell_follicular_lymphoma.npy +3 -0
  16. transcriptformer_cge/follicular_lymphoma/effector_cd8_positive_alpha_beta_t_cell_normal.npy +3 -0
  17. transcriptformer_cge/follicular_lymphoma/erythrocyte_follicular_lymphoma.npy +3 -0
  18. transcriptformer_cge/follicular_lymphoma/erythrocyte_normal.npy +3 -0
  19. transcriptformer_cge/follicular_lymphoma/exhausted_t_cell_follicular_lymphoma.npy +3 -0
  20. transcriptformer_cge/follicular_lymphoma/exhausted_t_cell_normal.npy +3 -0
  21. transcriptformer_cge/follicular_lymphoma/follicular_dendritic_cell_follicular_lymphoma.npy +3 -0
  22. transcriptformer_cge/follicular_lymphoma/follicular_dendritic_cell_normal.npy +3 -0
  23. transcriptformer_cge/follicular_lymphoma/malignant_cell_follicular_lymphoma.npy +3 -0
  24. transcriptformer_cge/follicular_lymphoma/mature_nk_t_cell_follicular_lymphoma.npy +3 -0
  25. transcriptformer_cge/follicular_lymphoma/mature_nk_t_cell_normal.npy +3 -0
  26. transcriptformer_cge/follicular_lymphoma/metadata.json.gz +3 -0
  27. transcriptformer_cge/follicular_lymphoma/myeloid_cell_follicular_lymphoma.npy +3 -0
  28. transcriptformer_cge/follicular_lymphoma/myeloid_cell_normal.npy +3 -0
  29. transcriptformer_cge/follicular_lymphoma/naive_thymus_derived_cd4_positive_alpha_beta_t_cell_follicular_lymphoma.npy +3 -0
  30. transcriptformer_cge/follicular_lymphoma/naive_thymus_derived_cd4_positive_alpha_beta_t_cell_normal.npy +3 -0
  31. transcriptformer_cge/follicular_lymphoma/naive_thymus_derived_cd8_positive_alpha_beta_t_cell_follicular_lymphoma.npy +3 -0
  32. transcriptformer_cge/follicular_lymphoma/naive_thymus_derived_cd8_positive_alpha_beta_t_cell_normal.npy +3 -0
  33. transcriptformer_cge/follicular_lymphoma/plasma_cell_follicular_lymphoma.npy +3 -0
  34. transcriptformer_cge/follicular_lymphoma/plasma_cell_normal.npy +3 -0
  35. transcriptformer_cge/follicular_lymphoma/plasmacytoid_dendritic_cell_follicular_lymphoma.npy +3 -0
  36. transcriptformer_cge/follicular_lymphoma/plasmacytoid_dendritic_cell_normal.npy +3 -0
  37. transcriptformer_cge/follicular_lymphoma/regulatory_t_cell_follicular_lymphoma.npy +3 -0
  38. transcriptformer_cge/follicular_lymphoma/regulatory_t_cell_normal.npy +3 -0
  39. transcriptformer_cge/follicular_lymphoma/t_cell_follicular_lymphoma.npy +3 -0
  40. transcriptformer_cge/follicular_lymphoma/t_cell_normal.npy +3 -0
  41. transcriptformer_cge/follicular_lymphoma/t_follicular_helper_cell_follicular_lymphoma.npy +3 -0
  42. transcriptformer_cge/follicular_lymphoma/t_follicular_helper_cell_normal.npy +3 -0
  43. transcriptformer_cge/hepatoblastoma/b_cell_normal.npy +3 -0
  44. transcriptformer_cge/hepatoblastoma/cholangiocyte_normal.npy +3 -0
  45. transcriptformer_cge/hepatoblastoma/endothelial_cell_blastoma.npy +3 -0
  46. transcriptformer_cge/hepatoblastoma/endothelial_cell_normal.npy +3 -0
  47. transcriptformer_cge/hepatoblastoma/erythrocyte_blastoma.npy +3 -0
  48. transcriptformer_cge/hepatoblastoma/hepatic_stellate_cell_blastoma.npy +3 -0
  49. transcriptformer_cge/hepatoblastoma/hepatic_stellate_cell_normal.npy +3 -0
  50. transcriptformer_cge/hepatoblastoma/hepatocyte_normal.npy +3 -0
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